• April 18, 2025

Machine Learning With Pytorch and Scikit-Learn

Machine Learning (ML) is at the core of modern intelligent applications. Whether you’re building recommendation systems, chatbots, or fraud detection algorithms, understanding ML is essential. Two of the most powerful Python libraries that enable this are scikit-learn and PyTorch.

  • scikit-learn is ideal for classical machine learning (linear regression, decision trees, SVMs, etc.).
  • PyTorch shines in deep learning tasks and gives more control over building and training neural networks.

Together, they offer a robust ecosystem for tackling a wide range of ML problems.


🔹 Scikit-learn Overview

What is Scikit-learn?

Scikit-learn is a high-level Python library built on NumPy, SciPy, and matplotlib. It’s designed for classical machine learning and provides simple APIs to:

  • Load and preprocess data
  • Train and evaluate models
  • Tune hyperparameters
  • Build pipelines

Key Features

  • Easy-to-use and consistent API
  • Supports regression, classification, clustering, and dimensionality reduction
  • Integrated model evaluation and cross-validation tools
  • Feature scaling, encoding, and splitting tools

🔹 PyTorch Overview

What is PyTorch?

PyTorch is a deep learning framework developed by Facebook AI. It’s favored for its dynamic computation graph (eager execution), making it flexible and pythonic.

It’s commonly used for:

  • Deep neural networks
  • Natural Language Processing (NLP)
  • Computer Vision
  • Reinforcement Learning

Key Features

  • Tensor operations with GPU acceleration
  • Autograd for automatic differentiation
  • Modular model architecture via torch.nn
  • Deep integration with Python’s ecosystem
  • Highly customizable training loop

🔸 Typical Use Cases

TaskUse scikit-learn?Use PyTorch?
Linear Regression✅ Yes🚫 Overkill
Image Classification🚫 Limited✅ Yes
SVM/Random Forest✅ Yes🚫 Not built-in
Custom Neural Network🚫 Not available✅ Yes
Quick Prototyping✅ Fast🚫 Slower

✅ Common Workflow in scikit-learn

Let’s say we want to predict house prices using a linear regression model:

from sklearn.datasets import load_boston
from sklearn.model_selection import train_test_split
from sklearn.linear_model import LinearRegression
from sklearn.metrics import mean_squared_error

# Load data
X, y = load_boston(return_X_y=True)

# Split data
X_train, X_test, y_train, y_test = train_test_split(X, y, test_size=0.2)

# Create model
model = LinearRegression()
model.fit(X_train, y_train)

# Predict
predictions = model.predict(X_test)

# Evaluate
print("MSE:", mean_squared_error(y_test, predictions))

You don’t need to define any custom loops—everything’s abstracted for simplicity.


✅ Common Workflow in PyTorch

Suppose you’re building a simple neural network:

import torch
import torch.nn as nn
import torch.optim as optim
from sklearn.datasets import load_boston
from sklearn.model_selection import train_test_split
from sklearn.preprocessing import StandardScaler

# Load and preprocess
X, y = load_boston(return_X_y=True)
X_train, X_test, y_train, y_test = train_test_split(X, y, test_size=0.2)
scaler = StandardScaler()
X_train = scaler.fit_transform(X_train)
X_test = scaler.transform(X_test)

# Convert to tensors
X_train = torch.tensor(X_train, dtype=torch.float32)
y_train = torch.tensor(y_train, dtype=torch.float32).view(-1, 1)

# Build model
class Net(nn.Module):
def __init__(self):
super(Net, self).__init__()
self.fc1 = nn.Linear(13, 50)
self.fc2 = nn.Linear(50, 1)

def forward(self, x):
x = torch.relu(self.fc1(x))
return self.fc2(x)

model = Net()
criterion = nn.MSELoss()
optimizer = optim.Adam(model.parameters(), lr=0.01)

# Training loop
for epoch in range(100):
outputs = model(X_train)
loss = criterion(outputs, y_train)

optimizer.zero_grad()
loss.backward()
optimizer.step()

if epoch % 10 == 0:
print(f'Epoch {epoch}, Loss: {loss.item()}')

Here, you have full control over every part of the training pipeline.


🔄 Combining Scikit-learn + PyTorch

You can integrate scikit-learn and PyTorch. Example: using sklearn.model_selection.KFold for PyTorch cross-validation, or preprocessing with sklearn.preprocessing.StandardScaler before sending data to a PyTorch model.

from sklearn.model_selection import KFold

kf = KFold(n_splits=5)
for train_idx, val_idx in kf.split(X):
X_train, X_val = X[train_idx], X[val_idx]
# Convert and train using PyTorch here

🔍 Feature Comparison Table

FeatureScikit-learnPyTorch
Learning Curve Simplicity✅ Very Simple❌ Manual
Custom Neural Nets❌ Not supported✅ Fully Supported
GPU Support❌ No✅ Yes
Model Interpretability✅ Easier❌ Needs work
Speed for Small Models✅ Fast❌ Slightly Slower
Production Deployment✅ Easy with Pickle✅ TorchScript, ONNX

📊 Visualization and Monitoring

For PyTorch:

  • Use TensorBoard to monitor training and visualize weights.
  • Libraries like TorchViz help visualize the model graph.

For Scikit-learn:

  • Use matplotlib, seaborn, and plot_learning_curve.

🧠 Deep Learning vs Classical ML

AspectClassical ML (Scikit-learn)Deep Learning (PyTorch)
Dataset SizeSmall to MediumMedium to Large
Feature EngineeringManualOften automatic (via NN layers)
Training TimeFastLong (can be accelerated)
Model ComplexitySimpleVery High
ExplainabilityEasierHarder

📦 Model Deployment

  • Scikit-learn models can be saved using joblib or pickle.
  • PyTorch models use torch.save() for saving and torch.load() for reloading.

Both can be served via APIs using Flask, FastAPI, or cloud platforms like AWS, GCP, or Azure.


📘 Learning Resources

  • Books:
    • Hands-On Machine Learning with Scikit-learn, Keras, and TensorFlow by Aurélien Géron
    • Deep Learning with PyTorch by Eli Stevens
  • Courses:
    • Coursera: ML with Python
    • fast.ai for PyTorch
    • Udacity: Intro to Deep Learning with PyTorch
  • Practice Sites:

✅ Final Thoughts

Machine Learning with scikit-learn and PyTorch gives you the best of both worlds:

  • Use scikit-learn when you need fast experimentation with reliable models and simpler pipelines.
  • Use PyTorch when you’re building neural networks, working with large datasets, or exploring cutting-edge AI.

Learning both allows you to be versatile and apply the right tools for the job, which is key in the rapidly evolving world of AI and ML.

Leave a Reply

Your email address will not be published. Required fields are marked *